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[gazebo-3] process has died // core dumped

asked 2019-04-28 06:13:02 -0600

stephanr gravatar image

Hello,

i try to start the erlecopter example in Gazebo from Erle Robotics for Q-Learning. But i faced some Problems and tried to spawn the Copter in the right Environment, first i start my conda Environment and after that i start roscore, then i open a new Terminal with the same conda Environment and source my catkin workspace, after that i put in the command:

roslaunch ardupilot_sitl_gazebo_plugin erlecopter_spawn.launch

Gazebo started correctly with the Quadcopter in it but the Terminal put out an Error:

[libprotobuf FATAL google/protobuf/stubs/common.cc:67] This program requires version 3.5.0 of the Protocol Buffer runtime library, but the installed version is 3.0.0.  Please update your library.  If you compiled the program yourself, make sure that your headers are from the same version of Protocol Buffers as your link-time library.  (Version verification failed in "/tmp/build/80754af9/opencv-suite_1535558553474/work/modules/dnn/misc/caffe/opencv-caffe.pb.cc".)
terminate called after throwing an instance of 'google::protobuf::FatalException'
  what():  This program requires version 3.5.0 of the Protocol Buffer runtime library, but the installed version is 3.0.0.  Please update your library.  If you compiled the program yourself, make sure that your headers are from the same version of Protocol Buffers as your link-time library.  (Version verification failed in "/tmp/build/80754af9/opencv-suite_1535558553474/work/modules/dnn/misc/caffe/opencv-caffe.pb.cc".)
Aborted (core dumped)
[gazebo-3] process has died [pid 4184, exit code 134, cmd /home/stephan/catkin_ws/src/gazebo_ros_pkgs/gazebo_ros/scripts/gzserver -u -e ode /home/stephan/catkin_ws/src/ardupilot_sitl_gazebo_plugin/ardupilot_sitl_gazebo_plugin/worlds/empty_world/empty.world __name:=gazebo __log:=/home/stephan/.ros/log/2845833a-69a3-11e9-9559-50e54953a336/gazebo-3.log].
log file: /home/stephan/.ros/log/2845833a-69a3-11e9-9559-50e54953a336/gazebo-3*.log

Because the error message says "core dumped" and in the empty.world file the physics is set with ode, i suspect that something is wrong with my graphic-driver... again.

I'm also not sure why i got this libprotobuf FATAL message, i already updates it to 3.6.1 and can see this version with the command: conda list

I have to say that this example from Erle Robotics is out of date, its for Ubuntu 14.04 with ROS Indigo and i changed a few things to compile it, cause i work with Ubuntu 18.04 and ROS Melodic.

I dont want to spam this Thread unnecessary long, if u want more Informations or Logs please tell me.

I'm grateful for every tip.

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Do you have a self compiled version of Gazebo or protobuf? I had this problems before because I ended up to have two versions of protobuf on my machine and gazebo was linking to the wrong one.

rasecg3 gravatar imagerasecg3 ( 2019-04-30 11:04:02 -0600 )edit

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answered 2019-04-30 13:58:47 -0600

stephanr gravatar image

I guess i have the same issue, because my pip show output is:

(cuda) stephan@stephan-Z:~$ pip show protobuf
Name: protobuf
Version: 3.7.1
Summary: Protocol Buffers
Home-page: https://developers.google.com/protocol-buffers/
Author: None
Author-email: None
License: 3-Clause BSD License
Location: /home/stephan/.local/lib/python2.7/site-packages
Requires: six, setuptools
Required-by: tensorflow-gpu, tensorboard

and my dpkg -l output is:

(cuda) stephan@stephan-Z:~$ dpkg -l |grep protoc
    ii  apturl                                          0.5.2ubuntu14.2                              amd64        install packages using the apt protocol - GTK+ frontend
    ii  apturl-common                                   0.5.2ubuntu14.2                              amd64        install packages using the apt protocol - common data
    ii  libcmis-0.5-5v5                                 0.5.1+git20160603-3build2                    amd64        CMIS protocol client library
    ii  libijs-0.35:amd64                               0.35-13                                      amd64        IJS raster image transport protocol: shared library
    ii  liblwp-protocol-https-perl                      6.07-2                                       all          HTTPS driver for LWP::UserAgent
    ii  libmbim-glib4:amd64                             1.14.2-2.1ubuntu1                            amd64        Support library to use the MBIM protocol
    ii  libnghttp2-14:amd64                             1.30.0-1ubuntu1                              amd64        library implementing HTTP/2 protocol (shared library)
    ii  libprotobuf-dev:amd64                           3.0.0-9.1ubuntu1                             amd64        protocol buffers C++ library (development files)
    ii  libprotobuf-lite10:amd64                        3.0.0-9.1ubuntu1                             amd64        protocol buffers C++ library (lite version)
    ii  libprotobuf10:amd64                             3.0.0-9.1ubuntu1                             amd64        protocol buffers C++ library
    ii  libprotoc-dev:amd64                             3.0.0-9.1ubuntu1                             amd64        protocol buffers compiler library (development files)
    ii  libprotoc10:amd64                               3.0.0-9.1ubuntu1                             amd64        protocol buffers compiler library
    ii  libqmi-glib5:amd64                              1.18.0-3ubuntu1                              amd64        Support library to use the Qualcomm MSM Interface (QMI) protocol
    ii  libunity-protocol-private0:amd64      
7.1.4+18.04.20180209.1-0ubuntu2              amd64        binding to get places into the launcher - private library
    ii  libx11-protocol-perl                            0.56-7                                       all          Perl module for the X Window System Protocol, version 11
    ii  libxkbcommon-x11-0:amd64                        0.8.0-1ubuntu0.1                             amd64        library to create keymaps with the XKB X11 protocol
    ii  protobuf-compiler                               3.0.0-9.1ubuntu1                             amd64        compiler for protocol buffer definition files
    ii  python-crypto                                   2.6.1-8ubuntu2                               amd64        cryptographic algorithms and protocols for Python
    ii  python-oauth                                    1.0.1-5                                      all          Python library implementing of the OAuth protocol
    ii  python-pyasn1-modules                           0.2.1-0.2                                    all          Collection of protocols modules written in ASN.1 language
    ii  python3-crypto                                  2.6.1-8ubuntu2                               amd64        cryptographic algorithms and protocols for Python 3
    ii  python3-oauth                                   1.0.1-5                                      all          Python 3 library implementing of the OAuth protocol
    ii  python3-protobuf                                3.0.0-9.1ubuntu1                             amd64        Python 3 bindings for protocol buffers
    ii  ros-melodic-xmlrpcpp                            1.14.3-0bionic.20190318.180337               amd64        XmlRpc++ is a C++ implementation of the XML-RPC protocol.

ii  x11proto-dev                                    2018.4-4                                     all          X11 extension protocols and auxiliary headers

it seems that i have 3.7.1 and 3.0.0 in different locations. I have to use conda for different Python environments and used this command as i firstly got the Error from the first post:

conda install -c anaconda libprotobuf

How did you fix the issue with the wrong direction, LD_LIBRARY_PATH?

Thank you!

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I had this problem before and it was because I had two protobuf installation on my machine and Gazebo was being complied with the oldest.

In order to solve that, I installed Gazebo from source. Note that ign-msgs and ign-transport also requires protobuf and need to install them from source as well.

Changing LD_LIBRARY_PATH will most likely make the cmake to find the correct protobuf version.

rasecg3 gravatar imagerasecg3 ( 2019-05-01 03:46:21 -0600 )edit

And if i change something in my catkin workspace folder (especially in the CMakeLists.txt where protobuf directory is mentioned) i have to rebuild it with catkin_make Thats it, right?

stephanr gravatar imagestephanr ( 2019-05-01 06:48:03 -0600 )edit
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Asked: 2019-04-28 06:13:02 -0600

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Last updated: Apr 30